8 #ifndef BASICMETROPOLISSAMPLING_H_
9 #define BASICMETROPOLISSAMPLING_H_
11 #include "RamachandranPlot.h"
13 #include "math/Gaussian.h"
20 void sample(
double time_duration,
double std_perturb,
bool record =
true,
string foldername =
"");
26 bool MetropolisStep(
double p,
double Q,
double p_proposal,
double Q_proposal);
27 double getP_Log( PProtein* chain);
28 double getscore( PProtein* protein);