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Autocorrelation.h
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/*
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* Autocorrelation.h
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*
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* Created on: Jul 17, 2012
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* Author: Yajia
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*/
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#ifndef AUTOCORRELATION_H_
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#define AUTOCORRELATION_H_
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#include <string.h>
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#include <vector.h>
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using namespace
std;
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class
Autocorrelation
{
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public
:
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static
void
getConformationAutocorrelation(
string
foldername,
int
n,
string
filehead,
string
outputname,
int
lag = 100,
int
size = 10);
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static
void
getVectorProperty( vector<double>& mean, vector<double>& variance,
const
vector<vector<double> >& sequence,
int
startIndex,
int
endIndex);
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static
void
getAutocorrelation( vector<vector<double> >& data, vector<double>& corr,
int
lag);
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};
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#endif
/* AUTOCORRELATION_H_ */
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